STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF2Putative E3 ubiquitin-protein ligase SH3RF2. (729 aa)    
Predicted Functional Partners:
RHPN1
Rhophilin-1.
   
 
 0.794
ARMCX4
Armadillo repeat-containing X-linked protein 4.
    
 
 0.781
TRAPPC12
Trafficking protein particle complex subunit 12.
      
 0.738
NPNT
Nephronectin.
      
 0.662
TENM4
Teneurin-4.
      
 0.655
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
  0.601
BOLA2B
LOW QUALITY PROTEIN: bolA-like protein 2; Belongs to the BolA/IbaG family.
      
 0.599
ENSEEUP00000002708
annotation not available
   
 
 0.587
ZFAND4
AN1-type zinc finger protein 4 isoform X1.
    
 0.520
SLC16A6
Monocarboxylate transporter 7.
      
 0.504
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.