STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000000887annotation not available (2857 aa)    
Predicted Functional Partners:
ENSEEUP00000002766
annotation not available
    
 0.929
DYNC1H1
Cytoplasmic dynein 1 heavy chain 1.
    
 0.888
RAB11B
Ras-related protein Rab-11B.
  
 0.804
ENSEEUP00000009220
annotation not available
   
 0.773
DYNC1LI2
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.762
PCM1
Pericentriolar material 1 protein.
   
 0.730
PLK2
Serine/threonine-protein kinase PLK.
   
 0.726
PLK5
Inactive serine/threonine-protein kinase PLK5; Belongs to the protein kinase superfamily.
   
 0.726
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
    
 0.709
LOC103108887
Dynein light chain.
    
 0.690
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (14%) [HD]