STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARNL3GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1. (936 aa)    
Predicted Functional Partners:
TBRG1
Transforming growth factor beta regulator 1.
   
  
 0.769
CARNMT1
Carnosine N-methyltransferase.
      
 0.768
RGS9
Regulator of G-protein signaling 9 isoform X1.
      
 0.766
GRAMD1B
GRAM domain-containing protein 1B.
      
 0.728
RGS8
Regulator of G-protein signaling 8 isoform X2.
      
 0.643
PCP4
Purkinje cell protein 4.
      
 0.634
DLG2
Disks large homolog 2 isoform X3.
    
 0.625
DLG1
Disks large homolog 1 isoform X1; Belongs to the MAGUK family.
    
 0.625
FXR1
Fragile X mental retardation syndrome-related protein 1 isoform X4.
      
 0.530
RALA
RAS like proto-oncogene A.
    
 0.528
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.