STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEKProtein DEK isoform X2. (375 aa)    
Predicted Functional Partners:
BAZ1B
Tyrosine-protein kinase BAZ1B.
    
 0.964
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 
 0.955
MYBBP1A
Myb-binding protein 1A isoform X2.
     
 0.955
DDX21
Nucleolar RNA helicase 2.
     
 0.949
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
   
 0.944
MYO1C
Unconventional myosin-Ic isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.929
TFAP2A
Transcription factor AP-2-alpha isoform X1.
    
 0.921
ENSEEUP00000009992
annotation not available
    
 
 0.803
ZGRF1
LOW QUALITY PROTEIN: protein ZGRF1.
    
 
 0.803
ERCC6
DNA excision repair protein ERCC-6.
    
 0.779
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.