SMG7 protein (Erinaceus europaeus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SMG7

Protein SMG7 isoform X4. (1172 aa)

Predicted Functional Partners:

SMG1

0.993

SMG5

0.991

SMG6

0.969

RBM8A

0.958

UPF3B

0.956

PABPC1

0.952

EIF4G1

0.890

PAIP1

0.890

ENSEEUP00000008798

0.890

ENSEEUP00000009992

0.888

Your Current Organism:

Erinaceus europaeus

NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF4G1	ENSEEUP00000009992	ENSEEUP00000003599	ENSEEUP00000009992	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	annotation not available	0.675
EIF4G1	PABPC1	ENSEEUP00000003599	ENSEEUP00000002477	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.969
EIF4G1	RBM8A	ENSEEUP00000003599	ENSEEUP00000008020	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	RNA binding motif protein 8A.	0.427
EIF4G1	SMG5	ENSEEUP00000003599	ENSEEUP00000011595	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	Protein SMG5 isoform X1.	0.891
EIF4G1	SMG6	ENSEEUP00000003599	ENSEEUP00000003215	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	Telomerase-binding protein EST1A isoform X1.	0.894
EIF4G1	SMG7	ENSEEUP00000003599	ENSEEUP00000001856	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	Protein SMG7 isoform X4.	0.890
EIF4G1	UPF3B	ENSEEUP00000003599	ENSEEUP00000012589	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	Regulator of nonsense transcripts 3B isoform X1.	0.482
ENSEEUP00000008798	ENSEEUP00000009992	ENSEEUP00000008798	ENSEEUP00000009992	annotation not available	annotation not available	0.675
ENSEEUP00000008798	PABPC1	ENSEEUP00000008798	ENSEEUP00000002477	annotation not available	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.969
ENSEEUP00000008798	RBM8A	ENSEEUP00000008798	ENSEEUP00000008020	annotation not available	RNA binding motif protein 8A.	0.427
ENSEEUP00000008798	SMG5	ENSEEUP00000008798	ENSEEUP00000011595	annotation not available	Protein SMG5 isoform X1.	0.891
ENSEEUP00000008798	SMG6	ENSEEUP00000008798	ENSEEUP00000003215	annotation not available	Telomerase-binding protein EST1A isoform X1.	0.894
ENSEEUP00000008798	SMG7	ENSEEUP00000008798	ENSEEUP00000001856	annotation not available	Protein SMG7 isoform X4.	0.890
ENSEEUP00000008798	UPF3B	ENSEEUP00000008798	ENSEEUP00000012589	annotation not available	Regulator of nonsense transcripts 3B isoform X1.	0.482
ENSEEUP00000009992	EIF4G1	ENSEEUP00000009992	ENSEEUP00000003599	annotation not available	Eukaryotic translation initiation factor 4 gamma 1 isoform X2.	0.675
ENSEEUP00000009992	ENSEEUP00000008798	ENSEEUP00000009992	ENSEEUP00000008798	annotation not available	annotation not available	0.675
ENSEEUP00000009992	PABPC1	ENSEEUP00000009992	ENSEEUP00000002477	annotation not available	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.791
ENSEEUP00000009992	PAIP1	ENSEEUP00000009992	ENSEEUP00000006596	annotation not available	Polyadenylate-binding protein-interacting protein 1.	0.675
ENSEEUP00000009992	RBM8A	ENSEEUP00000009992	ENSEEUP00000008020	annotation not available	RNA binding motif protein 8A.	0.918
ENSEEUP00000009992	SMG1	ENSEEUP00000009992	ENSEEUP00000009361	annotation not available	Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.	0.956