STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM72Transmembrane protein 72. (274 aa)    
Predicted Functional Partners:
RNF181
E3 ubiquitin-protein ligase RNF181.
      
 0.530
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.523
ENSEEUP00000013661
annotation not available
      
 0.487
ERICH6
LOW QUALITY PROTEIN: glutamate-rich protein 6.
      
 0.463
C4orf45
Uncharacterized protein C4orf45 homolog.
      
 0.457
EFCAB5
EF-hand calcium-binding domain-containing protein 5.
      
 0.453
ENSEEUP00000009839
annotation not available
      
 0.453
GALNT14
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.412
DPH6
Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP.
      
 0.412
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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