STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD2BATPase family AAA domain-containing protein 2B. (733 aa)    
Predicted Functional Partners:
SPATA5L1
Spermatogenesis associated 5 like 1.
 
  0.917
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.893
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.884
PSMC1
26S protease regulatory subunit 4 isoform X2; Belongs to the AAA ATPase family.
 
      0.875
PSMC4
26S protease regulatory subunit 6B isoform X1; Belongs to the AAA ATPase family.
 
 0.874
VCP
Valosin containing protein.
 
  0.870
PSMD6
26S proteasome non-ATPase regulatory subunit 6 isoform X2.
   
 0.833
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
   0.828
PSMD12
26S proteasome non-ATPase regulatory subunit 12 isoform X1.
   
 0.827
PSMD3
26S proteasome non-ATPase regulatory subunit 3.
   
 0.825
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.