STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000002484annotation not available (766 aa)    
Predicted Functional Partners:
IFRD2
Interferon-related developmental regulator 2.
      
 0.831
OSBPL10
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.800
ENSEEUP00000012731
annotation not available
    
  
0.800
PTDSS1
Phosphatidylserine synthase 1.
      
 0.783
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 
 0.782
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.771
STXBP5
Syntaxin-binding protein 5.
   
  
 0.768
SH3RF1
E3 ubiquitin-protein ligase SH3RF1.
   
  
 0.767
KHDRBS2
KH domain-containing, RNA-binding, signal transduction-associated protein 2.
      
 0.731
QDPR
Dihydropteridine reductase.
      
 0.731
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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