STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL560S ribosomal protein L5. (297 aa)    
Predicted Functional Partners:
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.999
RPL30
60S ribosomal protein L30.
   
 0.999
ENSEEUP00000001016
annotation not available
  
 0.999
ENSEEUP00000001848
annotation not available
  
 0.999
RPS11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.999
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
RPL39L
60S ribosomal protein L39.
  
 0.999
LOC103107183
60S ribosomal protein L17 isoform X2; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
LOC103115317
60S ribosomal protein L27a-like.
  
 0.999
RPL14
60S ribosomal protein L14.
  
 0.999
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.