STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM4Protein FAM26D. (312 aa)    
Predicted Functional Partners:
C1orf109
Uncharacterized protein C1orf109 homolog isoform X1.
   
    0.823
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
    0.811
ENSEEUP00000012315
annotation not available
   
    0.805
KIAA0226L
Uncharacterized protein KIAA0226-like homolog isoform X2.
   
    0.804
ENSEEUP00000002194
annotation not available
   
    0.804
CWC25
pre-mRNA-splicing factor CWC25 homolog.
   
    0.786
LOC103110985
Nuclear autoantigen Sp-100-like.
   
    0.775
LOC103119655
Epithelial chloride channel protein-like.
   
    0.772
FBXO47
F-box only protein 47.
   
    0.771
ENSEEUP00000010588
annotation not available
   
    0.770
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.