STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR35Proline-rich protein 35. (453 aa)    
Predicted Functional Partners:
CCDC36
Coiled-coil domain-containing protein 36.
      
 0.769
RRP36
Ribosomal RNA processing protein 36 homolog.
      
 0.769
SIPA1L2
Signal-induced proliferation-associated 1-like protein 2.
      
 0.741
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.718
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
      
 0.661
RAB11FIP3
Rab11 family-interacting protein 3 isoform X2.
      
 0.657
METRN
Meteorin.
      
 0.638
IFT140
Intraflagellar transport protein 140 homolog.
      
 0.623
XPC
DNA repair protein complementing XP-C cells.
      
 0.585
KLHDC8B
Kelch domain-containing protein 8B.
      
 0.583
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.