STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCO2Beta,beta-carotene 9',10'-oxygenase. (447 aa)    
Predicted Functional Partners:
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
      
 0.768
ENSEEUP00000004399
annotation not available
      
 0.760
LOC103122860
Olfactory receptor.
      
 0.693
ENSEEUP00000006207
annotation not available
   
 0.660
NT5DC2
5'-nucleotidase domain-containing protein 2 isoform X1.
      
 0.654
NAALADL2
Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2.
     
 0.642
LRAT
Lecithin retinol acyltransferase.
     
 0.640
FDFT1
Squalene synthase isoform X2.
    
 0.627
FAM92B
Protein FAM92B.
      
 0.625
TXNDC12
Thioredoxin domain containing 12.
     
 0.622
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.