STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM5Protein FAM26E. (309 aa)    
Predicted Functional Partners:
C1orf109
Uncharacterized protein C1orf109 homolog isoform X1.
   
    0.585
KIAA0226L
Uncharacterized protein KIAA0226-like homolog isoform X2.
   
    0.491
ENSEEUP00000006777
annotation not available
      
 0.489
CWC25
pre-mRNA-splicing factor CWC25 homolog.
   
    0.474
FBXO47
F-box only protein 47.
   
    0.447
IBTK
Inhibitor of Bruton tyrosine kinase.
      
 0.426
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.