STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000003881annotation not available (189 aa)    
Predicted Functional Partners:
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.967
SRSF1
Serine/arginine-rich splicing factor 1 isoform X2.
   
 0.947
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.943
NCBP2L
Nuclear cap binding protein subunit 2 like.
    
 0.941
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.927
ACIN1
Apoptotic chromatin condensation inducer in the nucleus isoform X1.
   
 0.925
SRSF7
Serine/arginine-rich splicing factor 7 isoform X1.
   
 0.919
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.914
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
  0.906
PAPOLG
poly(A) polymerase gamma.
   
 0.901
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.