STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (103 aa)    
Predicted Functional Partners:
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
TRAPPC8
LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8.
    
 0.998
TRAPPC2B
Trafficking protein particle complex subunit 2.
   
 0.996
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein isoform X2.
   
 0.996
TRAPPC6A
Trafficking protein particle complex 6A.
   
 0.995
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.995
TRAPPC9
Trafficking protein particle complex subunit 9.
    
 0.995
TRAPPC11
Trafficking protein particle complex subunit 11.
    
 0.995
TRAPPC3
Trafficking protein particle complex subunit 3 isoform X2.
   
 0.993
ENSEEUP00000008425
annotation not available
   
 0.990
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.