STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSFCathepsin F; Belongs to the peptidase C1 family. (471 aa)    
Predicted Functional Partners:
ENSEEUP00000007737
annotation not available
   
 0.870
XIAP
E3 ubiquitin-protein ligase XIAP.
     
 0.864
ENSEEUP00000008705
annotation not available
     
 0.864
BCL2L1
Bcl-2-like protein 1 isoform X1.
     
 0.864
BIRC3
Baculoviral IAP repeat-containing protein 3.
     
 0.852
BIRC2
Baculoviral IAP repeat-containing protein 2.
     
 0.852
GRN
Granulins isoform X1.
   
 0.828
ENSEEUP00000000722
annotation not available
 
 0.815
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.806
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.785
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.