STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIASLipoic acid synthetase. (372 aa)    
Predicted Functional Partners:
ENSEEUP00000008787
annotation not available
   
 0.968
KCNE3
Potassium voltage-gated channel subfamily E member 3.
  
 
 0.899
RBM47
RNA-binding protein 47 isoform X2.
      
 0.766
NFU1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial.
  
 
 0.718
SLC18A1
LOW QUALITY PROTEIN: chromaffin granule amine transporter.
      
 0.707
ENSEEUP00000003663
annotation not available
     
 0.695
NUDT4
Diphosphoinositol polyphosphate phosphohydrolase 2 isoform X1.
    
 0.682
N4BP2
NEDD4-binding protein 2.
      
 0.675
ISCA2
Iron-sulfur cluster assembly 2 homolog, mitochondrial.
  
  
 0.667
PDS5A
Sister chromatid cohesion protein PDS5 homolog A.
      
 0.663
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.