STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13CProtein FAM13C isoform X1. (604 aa)    
Predicted Functional Partners:
ENSEEUP00000012247
annotation not available
      
 0.770
FLNC
filamin-C isoform X1.
    
 
 0.560
NR1I3
Nuclear receptor subfamily 1 group I member 3.
      
 0.530
FAM131C
Protein FAM131C.
      
 0.530
MSLN
Mesothelin.
      
 0.511
LOC103117933
Mesothelin-like protein.
      
 0.511
SFRP4
Secreted frizzled-related protein 4.
      
 0.504
GABRB3
Gamma-aminobutyric acid receptor subunit beta-3 isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.469
ENSEEUP00000007134
annotation not available
    
 0.467
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.467
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.