STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LANCL2LOW QUALITY PROTEIN: lanC-like protein 2. (447 aa)    
Predicted Functional Partners:
SUMF2
Sulfatase-modifying factor 2 isoform X3.
    
 
 0.499
SEC61G
Protein transport protein Sec61 subunit gamma.
      
 0.497
TMEM47
Transmembrane protein 47.
   
  
 0.494
ENSEEUP00000012304
annotation not available
      
 0.493
ANKS6
Ankyrin repeat and SAM domain-containing protein 6.
    
 
 0.488
PLEKHG5
Pleckstrin homology domain-containing family G member 5 isoform X2.
      
 0.483
PMFBP1
Polyamine-modulated factor 1-binding protein 1.
      
 0.476
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A isoform X1.
      
 0.465
PRRG1
Transmembrane gamma-carboxyglutamic acid protein 1.
      
 0.463
ENSEEUP00000011498
annotation not available
      
 0.463
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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