STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODC1Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (461 aa)    
Predicted Functional Partners:
OAT
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.951
ARG2
Arginase-2, mitochondrial; Belongs to the arginase family.
  
 
 0.949
ENSEEUP00000002750
annotation not available
  
 0.947
AGMAT
Agmatinase, mitochondrial; Belongs to the arginase family.
  
 
 0.945
ARG1
Arginase.
  
 
 0.941
NQO1
NAD(P)H dehydrogenase [quinone] 1.
    
 0.939
SAT1
Spermidine/spermine N1-acetyltransferase 1.
    
 0.930
SATL1
Spermidine/spermine N(1)-acetyltransferase-like protein 1.
    
 0.930
AOC1
Amine oxidase.
   
 
 0.923
ENSEEUP00000014547
annotation not available
    
 0.906
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.