GAR1 protein (Erinaceus europaeus) - STRING interaction network

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GAR1

H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (223 aa)

Predicted Functional Partners:

DKC1

0.999

LOC103125078

0.999

WRAP53

0.996

TRUB1

0.985

TRUB2

0.970

SHQ1

0.955

NOP56

0.924

RPP38

0.923

ENSEEUP00000008397

0.911

NOP58

0.911

Your Current Organism:

Erinaceus europaeus

NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DKC1	ENSEEUP00000008397	ENSEEUP00000003042	ENSEEUP00000008397	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	annotation not available	0.970
DKC1	GAR1	ENSEEUP00000003042	ENSEEUP00000004318	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
DKC1	LOC103125078	ENSEEUP00000003042	ENSEEUP00000007990	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	H/ACA ribonucleoprotein complex subunit 3.	0.999
DKC1	NOP56	ENSEEUP00000003042	ENSEEUP00000001529	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	Nucleolar protein 56.	0.999
DKC1	NOP58	ENSEEUP00000003042	ENSEEUP00000014385	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	Nucleolar protein 58.	0.970
DKC1	RPP38	ENSEEUP00000003042	ENSEEUP00000013372	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	Ribonuclease P protein subunit p38.	0.945
DKC1	SHQ1	ENSEEUP00000003042	ENSEEUP00000009632	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	Protein SHQ1 homolog.	0.998
DKC1	TRUB1	ENSEEUP00000003042	ENSEEUP00000012762	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	Probable tRNA pseudouridine synthase 1.	0.403
DKC1	WRAP53	ENSEEUP00000003042	ENSEEUP00000013336	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	WD repeat containing antisense to TP53.	0.998
ENSEEUP00000008397	DKC1	ENSEEUP00000008397	ENSEEUP00000003042	annotation not available	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	0.970
ENSEEUP00000008397	GAR1	ENSEEUP00000008397	ENSEEUP00000004318	annotation not available	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.911
ENSEEUP00000008397	LOC103125078	ENSEEUP00000008397	ENSEEUP00000007990	annotation not available	H/ACA ribonucleoprotein complex subunit 3.	0.588
ENSEEUP00000008397	NOP56	ENSEEUP00000008397	ENSEEUP00000001529	annotation not available	Nucleolar protein 56.	0.999
ENSEEUP00000008397	RPP38	ENSEEUP00000008397	ENSEEUP00000013372	annotation not available	Ribonuclease P protein subunit p38.	0.992
ENSEEUP00000008397	SHQ1	ENSEEUP00000008397	ENSEEUP00000009632	annotation not available	Protein SHQ1 homolog.	0.545
ENSEEUP00000008397	TRUB1	ENSEEUP00000008397	ENSEEUP00000012762	annotation not available	Probable tRNA pseudouridine synthase 1.	0.930
ENSEEUP00000008397	TRUB2	ENSEEUP00000008397	ENSEEUP00000008114	annotation not available	Probable tRNA pseudouridine synthase 2.	0.908
GAR1	DKC1	ENSEEUP00000004318	ENSEEUP00000003042	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	H/ACA ribonucleoprotein complex subunit 4 isoform X1.	0.999
GAR1	ENSEEUP00000008397	ENSEEUP00000004318	ENSEEUP00000008397	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	annotation not available	0.911
GAR1	LOC103125078	ENSEEUP00000004318	ENSEEUP00000007990	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	H/ACA ribonucleoprotein complex subunit 3.	0.999

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