STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB5EF-hand calcium-binding domain-containing protein 5. (1026 aa)    
Predicted Functional Partners:
NSRP1
Nuclear speckle splicing regulatory protein 1.
 
    
 0.668
TEP1
Telomerase associated protein 1.
    
 0.659
ENSEEUP00000012996
annotation not available
    
 0.651
ZMAT4
Zinc finger matrin-type protein 4.
      
 0.599
C1QC
Complement C1q subcomponent subunit C.
    
  0.573
GNAS
LOW QUALITY PROTEIN: guanine nucleotide-binding protein G(S) subunit alpha isoforms XLas-like.
    
 0.569
GPA33
Cell surface A33 antigen.
    
 0.545
ENSEEUP00000009839
annotation not available
    
 0.531
C4orf45
Uncharacterized protein C4orf45 homolog.
      
 0.508
ERICH6
LOW QUALITY PROTEIN: glutamate-rich protein 6.
      
 0.508
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (18%) [HD]