STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R1CProtein phosphatase 1 regulatory subunit 1C isoform X1. (89 aa)    
Predicted Functional Partners:
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
 0.709
PPP2CB
Serine/threonine-protein phosphatase.
     
 0.667
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
 0.666
ENSEEUP00000005868
annotation not available
     
 0.666
PRKG2
cGMP-dependent protein kinase.
     
 0.640
ENSEEUP00000001610
annotation not available
     
 0.631
SLC6A13
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.578
ENSEEUP00000002875
annotation not available
     
 0.565
PPP3CC
Serine/threonine-protein phosphatase.
     
 0.565
ENSEEUP00000000717
annotation not available
     
 0.564
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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