STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF189Zinc finger protein 189 isoform X6. (626 aa)    
Predicted Functional Partners:
HMG20A
High mobility group protein 20A.
    
 0.713
AK9
Adenylate kinase 9.
    
  0.710
ENSEEUP00000007878
annotation not available
    
  0.710
ENSEEUP00000012754
annotation not available
    
 0.599
ENSEEUP00000001591
annotation not available
     
 0.595
ATF1
Cyclic AMP-dependent transcription factor ATF-1 isoform X1.
    
 
 0.563
APPBP2
Amyloid beta precursor protein binding protein 2.
    
 0.535
TRIM28
Transcription intermediary factor 1-beta.
    
  0.517
BARD1
BRCA1-associated RING domain protein 1.
    
  0.510
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
   
  0.492
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.