STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSG101Tumor susceptibility gene 101 protein. (391 aa)    
Predicted Functional Partners:
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.999
ENSEEUP00000008965
annotation not available
      
 0.999
VPS37B
Vacuolar protein sorting-associated protein 37B.
    
 0.997
CD9
Tetraspanin.
      
 0.996
ENSEEUP00000014290
annotation not available
    
 0.994
MVB12B
Multivesicular body subunit 12B.
    
 0.989
UBAP1
Ubiquitin-associated protein 1 isoform X1.
   
 0.980
VPS36
Vacuolar protein-sorting-associated protein 36 isoform X1.
    
 0.978
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.972
ENSEEUP00000002708
annotation not available
   
 0.970
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.