RIBC1 protein (Erinaceus europaeus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

RIBC1

RIB43A-like with coiled-coils protein 1. (340 aa)

Predicted Functional Partners:

TEKT2

0.874

TEKT3

0.871

EFHC1

0.842

TEKT1

0.840

DYNLT3

0.840

LOC103117875

0.839

MNS1

0.834

EFHB

0.832

ENSEEUP00000006129

0.829

ENSEEUP00000007624

0.824

Your Current Organism:

Erinaceus europaeus

NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DYNLT3	RIBC1	ENSEEUP00000010692	ENSEEUP00000004505	Dynein light chain Tctex-type 3.	RIB43A-like with coiled-coils protein 1.	0.840
EFHB	EFHC1	ENSEEUP00000000975	ENSEEUP00000008512	EF-hand domain-containing family member B.	EF-hand domain-containing protein 1.	0.922
EFHB	ENSEEUP00000006129	ENSEEUP00000000975	ENSEEUP00000006129	EF-hand domain-containing family member B.	annotation not available	0.922
EFHB	ENSEEUP00000007624	ENSEEUP00000000975	ENSEEUP00000007624	EF-hand domain-containing family member B.	annotation not available	0.924
EFHB	LOC103117875	ENSEEUP00000000975	ENSEEUP00000011577	EF-hand domain-containing family member B.	Tektin-4.	0.927
EFHB	MNS1	ENSEEUP00000000975	ENSEEUP00000008872	EF-hand domain-containing family member B.	Meiosis-specific nuclear structural protein 1.	0.923
EFHB	RIBC1	ENSEEUP00000000975	ENSEEUP00000004505	EF-hand domain-containing family member B.	RIB43A-like with coiled-coils protein 1.	0.832
EFHB	TEKT1	ENSEEUP00000000975	ENSEEUP00000005388	EF-hand domain-containing family member B.	Tektin-1.	0.927
EFHB	TEKT2	ENSEEUP00000000975	ENSEEUP00000009424	EF-hand domain-containing family member B.	Tektin-2.	0.923
EFHB	TEKT3	ENSEEUP00000000975	ENSEEUP00000000626	EF-hand domain-containing family member B.	Tektin-3.	0.927
EFHC1	EFHB	ENSEEUP00000008512	ENSEEUP00000000975	EF-hand domain-containing protein 1.	EF-hand domain-containing family member B.	0.922
EFHC1	ENSEEUP00000006129	ENSEEUP00000008512	ENSEEUP00000006129	EF-hand domain-containing protein 1.	annotation not available	0.927
EFHC1	ENSEEUP00000007624	ENSEEUP00000008512	ENSEEUP00000007624	EF-hand domain-containing protein 1.	annotation not available	0.936
EFHC1	LOC103117875	ENSEEUP00000008512	ENSEEUP00000011577	EF-hand domain-containing protein 1.	Tektin-4.	0.929
EFHC1	MNS1	ENSEEUP00000008512	ENSEEUP00000008872	EF-hand domain-containing protein 1.	Meiosis-specific nuclear structural protein 1.	0.918
EFHC1	RIBC1	ENSEEUP00000008512	ENSEEUP00000004505	EF-hand domain-containing protein 1.	RIB43A-like with coiled-coils protein 1.	0.842
EFHC1	TEKT1	ENSEEUP00000008512	ENSEEUP00000005388	EF-hand domain-containing protein 1.	Tektin-1.	0.935
EFHC1	TEKT2	ENSEEUP00000008512	ENSEEUP00000009424	EF-hand domain-containing protein 1.	Tektin-2.	0.957
EFHC1	TEKT3	ENSEEUP00000008512	ENSEEUP00000000626	EF-hand domain-containing protein 1.	Tektin-3.	0.956
ENSEEUP00000006129	EFHB	ENSEEUP00000006129	ENSEEUP00000000975	annotation not available	EF-hand domain-containing family member B.	0.922