STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin-3. (955 aa)    
Predicted Functional Partners:
SRSF1
Serine/arginine-rich splicing factor 1 isoform X2.
    
 
 0.936
SRSF6
Serine and arginine rich splicing factor 6.
    
 
 0.861
SRSF4
Serine/arginine-rich splicing factor 4 isoform X2.
    
 
 0.861
NUP153
LOW QUALITY PROTEIN: nuclear pore complex protein Nup153.
   
 
 0.835
SRSF9
Serine and arginine rich splicing factor 9.
    
 
 0.830
ENSEEUP00000003553
annotation not available
   
 
 0.822
ADGRB3
Adhesion G protein-coupled receptor B3-like.
   
 
 0.822
ZNF318
Zinc finger protein 318.
    
 
 0.815
CPSF6
Cleavage and polyadenylation specificity factor subunit 6 isoform X1.
   
 
 0.812
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X2.
   
    0.804
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.