STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000004822annotation not available (106 aa)    
Predicted Functional Partners:
ENSEEUP00000014582
annotation not available
    
 
 0.959
TMEM147
Transmembrane protein 147 isoform X1.
   
   0.949
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling; Belongs to the TMCO1 family.
   
   0.932
RAB5IF
Uncharacterized protein C20orf24 isoform X1.
   
   0.925
RPL18
60S ribosomal protein L18.
   
   0.921
ENSEEUP00000010642
annotation not available
   
   0.919
RPL13A
60S ribosomal protein L13a isoform X4; Belongs to the universal ribosomal protein uL13 family.
   
   0.919
RPL30
60S ribosomal protein L30.
    
   0.918
ENSEEUP00000001016
annotation not available
    
   0.918
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.918
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.