STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIC1Cysteine rich hydrophobic domain 1. (201 aa)    
Predicted Functional Partners:
WASF3
WASP family member 3.
      
 0.747
RLIM
E3 ubiquitin-protein ligase RLIM.
      
 0.687
PIN4
Peptidyl-prolyl cis-trans isomerase.
      
 0.636
YIPF6
Protein YIPF.
      
 0.632
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.628
LCMT2
tRNA wybutosine-synthesizing protein 4.
      
 0.605
SLC7A3
Cationic amino acid transporter 3 isoform X2.
      
 0.577
DLG3
Disks large homolog 3 isoform X1; Belongs to the MAGUK family.
      
 0.571
RPUSD2
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
      
 0.547
SLC16A10
Monocarboxylate transporter 10.
      
 0.535
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.