STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103107805Serine/threonine-protein kinase/endoribonuclease IRE2-like. (946 aa)    
Predicted Functional Partners:
ANKRD45
Ankyrin repeat domain-containing protein 45.
   
 0.938
UBFD1
Ubiquitin domain-containing protein UBFD1.
 
  
 0.893
TRAF4
TNF receptor-associated factor.
    
 0.810
XBP1
LOW QUALITY PROTEIN: X-box-binding protein 1.
    
 0.778
ENSEEUP00000001759
annotation not available
    
 0.774
TRAF1
TNF receptor-associated factor.
    
 0.774
ENSEEUP00000011552
annotation not available
      
 0.735
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
   
 0.726
MAP3K6
Mitogen-activated protein kinase kinase kinase 6 isoform X1.
   
0.726
ABCE1
ATP-binding cassette sub-family E member 1.
   
 0.713
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.