STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3BRas-related protein Rab-3B. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X2.
    
 0.971
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.839
CASK
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.834
SYT2
Synaptotagmin-2.
   
 0.796
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit.
    
 
 0.785
ENSEEUP00000007058
annotation not available
   
 0.774
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.773
RABL3
Rab-like protein 3.
     
 0.770
SYN3
Synapsin-3 isoform X2.
   
 0.749
CHML
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.742
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.