STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000005422annotation not available (490 aa)    
Predicted Functional Partners:
LYZL6
Lysozyme-like protein 6; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.779
GIMAP8
GTPase IMAP family member 8.
   
  
 0.630
TBC1D22A
TBC1 domain family member 22A isoform X1.
      
 0.529
ENSEEUP00000002764
annotation not available
      
 0.493
NCDN
Neurochondrin isoform X1.
      
 0.489
WWC3
Protein WWC3.
      
 0.483
ARHGAP24
Rho GTPase-activating protein 24 isoform X1.
   
  
 0.481
ELMO1
Engulfment and cell motility 1.
 
    
 0.479
SPTA1
Spectrin alpha chain, erythrocytic 1 isoform X2.
      
 0.469
ELMOD1
ELMO domain-containing protein 1.
      
 0.468
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.