STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000005514annotation not available (311 aa)    
Predicted Functional Partners:
SYF2
pre-mRNA-splicing factor SYF2.
    
 0.942
NUP214
Nuclear pore complex protein Nup214.
    
 0.813
NUP88
Nuclear pore complex protein Nup88 isoform X1.
    
 0.813
CDC40
pre-mRNA-processing factor 17.
    
 0.806
SUMO1
Small ubiquitin-related modifier.
   
 0.802
NUP155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.801
RANGAP1
Ran GTPase-activating protein 1.
   
 0.801
SEH1L
SEH1 like nucleoporin.
    
 0.794
NUP93
Nucleoporin 93.
   
 0.786
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.773
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.