Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD40LG | ENSEEUP00000001759 | ENSEEUP00000011932 | ENSEEUP00000001759 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | annotation not available | 0.723 |
CD40LG | ENSEEUP00000005654 | ENSEEUP00000011932 | ENSEEUP00000005654 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | annotation not available | 0.524 |
CD40LG | LTA | ENSEEUP00000011932 | ENSEEUP00000003065 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Lymphotoxin-alpha; Belongs to the tumor necrosis factor family. | 0.622 |
CD40LG | TRAF1 | ENSEEUP00000011932 | ENSEEUP00000003251 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF receptor-associated factor. | 0.651 |
CD40LG | TRAF3 | ENSEEUP00000011932 | ENSEEUP00000009903 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.763 |
ENSEEUP00000001759 | CD40LG | ENSEEUP00000001759 | ENSEEUP00000011932 | annotation not available | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.723 |
ENSEEUP00000001759 | ENSEEUP00000005654 | ENSEEUP00000001759 | ENSEEUP00000005654 | annotation not available | annotation not available | 0.690 |
ENSEEUP00000001759 | LTA | ENSEEUP00000001759 | ENSEEUP00000003065 | annotation not available | Lymphotoxin-alpha; Belongs to the tumor necrosis factor family. | 0.401 |
ENSEEUP00000001759 | TRAF1 | ENSEEUP00000001759 | ENSEEUP00000003251 | annotation not available | TNF receptor-associated factor. | 0.943 |
ENSEEUP00000001759 | TRAF3 | ENSEEUP00000001759 | ENSEEUP00000009903 | annotation not available | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.976 |
ENSEEUP00000005654 | CD40LG | ENSEEUP00000005654 | ENSEEUP00000011932 | annotation not available | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.524 |
ENSEEUP00000005654 | ENSEEUP00000001759 | ENSEEUP00000005654 | ENSEEUP00000001759 | annotation not available | annotation not available | 0.690 |
ENSEEUP00000005654 | FCGRT | ENSEEUP00000005654 | ENSEEUP00000000071 | annotation not available | IgG receptor FcRn large subunit p51. | 0.530 |
ENSEEUP00000005654 | LTA | ENSEEUP00000005654 | ENSEEUP00000003065 | annotation not available | Lymphotoxin-alpha; Belongs to the tumor necrosis factor family. | 0.659 |
ENSEEUP00000005654 | TNFSF15 | ENSEEUP00000005654 | ENSEEUP00000005185 | annotation not available | Tumor necrosis factor ligand superfamily member 15. | 0.678 |
ENSEEUP00000005654 | TNFSF18 | ENSEEUP00000005654 | ENSEEUP00000005675 | annotation not available | Tumor necrosis factor ligand superfamily member 18. | 0.506 |
ENSEEUP00000005654 | TNFSF8 | ENSEEUP00000005654 | ENSEEUP00000009591 | annotation not available | Tumor necrosis factor ligand superfamily member 8; Belongs to the tumor necrosis factor family. | 0.972 |
ENSEEUP00000005654 | TRAF1 | ENSEEUP00000005654 | ENSEEUP00000003251 | annotation not available | TNF receptor-associated factor. | 0.690 |
ENSEEUP00000005654 | TRAF3 | ENSEEUP00000005654 | ENSEEUP00000009903 | annotation not available | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.734 |
ENSEEUP00000005654 | VTCN1 | ENSEEUP00000005654 | ENSEEUP00000011186 | annotation not available | V-set domain-containing T-cell activation inhibitor 1. | 0.495 |
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