STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD4ATP binding cassette subfamily D member 4. (504 aa)    
Predicted Functional Partners:
LMBRD1
Probable lysosomal cobalamin transporter.
    
 0.964
ENSEEUP00000000734
annotation not available
   
0.913
ABCD3
ATP-binding cassette sub-family D member 3 isoform X3.
 
   
0.863
RAD51B
DNA repair protein RAD51 homolog 2.
    
 
 0.803
RAD51D
DNA repair protein RAD51 homolog 4 isoform X1.
    
 
 0.803
ENSEEUP00000013918
annotation not available
   
 0.799
ABCF3
ATP-binding cassette sub-family F member 3 isoform X1.
      
 0.795
PEX14
Peroxisomal membrane protein PEX14.
   
 0.755
PEX16
Peroxisomal membrane protein PEX16.
     
 0.727
PEX13
Peroxisome biogenesis factor 13.
   
 
 0.718
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.