STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKHD1Ankyrin repeat and KH domain-containing protein 1 isoform X1. (2258 aa)    
Predicted Functional Partners:
PRRC2C
Protein PRRC2C isoform X7.
   
 
 0.893
USP34
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 34; Belongs to the peptidase C19 family.
   
 0.890
UBAP2L
Ubiquitin-associated protein 2-like isoform X5.
   
 
 0.821
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
 0.807
PRRC2A
Protein PRRC2A.
   
 
 0.783
SEC24B
Protein transport protein Sec24B.
   
 0.771
CSDE1
Cold shock domain containing E1.
  
 0.753
NUDC
Nuclear migration protein nudC.
     
 0.741
SBNO1
Protein strawberry notch homolog 1.
   
   0.722
ZFP91
E3 ubiquitin-protein ligase ZFP91.
    
 
 0.708
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.