STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP1Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (726 aa)    
Predicted Functional Partners:
WDR48
WD repeat-containing protein 48 isoform X1.
    
 0.999
FANCD2
Fanconi anemia group D2 protein.
    
 0.988
FANCI
Fanconi anemia group I protein isoform X2.
   
 0.973
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
  0.940
WDR20
WD repeat-containing protein 20 isoform X2.
    
 0.940
FANCL
E3 ubiquitin-protein ligase FANCL.
     
 0.928
PCNA
Proliferating cell nuclear antigen.
   
  0.926
ATAD5
ATPase family AAA domain containing 5.
   
 0.862
RAD18
E3 ubiquitin-protein ligase RAD18.
   
 
 0.852
ENSEEUP00000004885
annotation not available
     
 0.814
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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