STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103117369HLA class II histocompatibility antigen, DQ alpha 2 chain; Belongs to the MHC class II family. (255 aa)    
Predicted Functional Partners:
LOC103117419
HLA class II histocompatibility antigen, DQ beta 1 chain.
   
0.996
CD74
HLA class II histocompatibility antigen gamma chain isoform X1.
   
 0.990
HLA-DMA
HLA class II histocompatibility antigen, DM alpha chain isoform X2; Belongs to the MHC class II family.
  
0.974
HLA-DRA
Mamu class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.
  
 
0.968
ENSEEUP00000009715
annotation not available
   
 0.952
CD4
T-cell surface glycoprotein CD4.
     
 0.891
ENSEEUP00000004725
annotation not available
    
  0.880
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.871
ENSEEUP00000005054
annotation not available
    
  0.765
ENSEEUP00000013595
annotation not available
    
  0.741
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.