STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSRNP1Cysteine/serine-rich nuclear protein 1. (583 aa)    
Predicted Functional Partners:
ENSEEUP00000008556
annotation not available
      
 0.667
ENSEEUP00000007067
annotation not available
      
 0.607
UBFD1
Ubiquitin domain-containing protein UBFD1.
      
 0.593
ARID5A
AT-rich interactive domain-containing protein 5A.
   
  
 0.549
LOC107522212
Solute carrier family 22 member 13-like.
      
 0.545
SLC22A14
Solute carrier family 22 member 14.
      
 0.545
IGSF6
Immunoglobulin superfamily member 6.
      
 0.521
RAPGEF5
Rap guanine nucleotide exchange factor 5.
      
 0.493
ENSEEUP00000001064
annotation not available
      
 0.491
CLEC12A
C-type lectin domain family 12 member A.
      
 0.491
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.