STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD4Low-density lipoprotein receptor class A domain-containing protein 4 isoform X3. (306 aa)    
Predicted Functional Partners:
ENSEEUP00000012140
annotation not available
    
 0.845
TSR1
pre-rRNA-processing protein TSR1 homolog.
   
  0.778
ISM1
Isthmin-1.
     
 0.766
SMAD2
Mothers against decapentaplegic homolog.
    
 0.759
ENSEEUP00000011821
annotation not available
   
 0.749
ENSEEUP00000003890
annotation not available
      
 0.745
MRPS5
28S ribosomal protein S5, mitochondrial.
   
 0.709
ENSEEUP00000007429
annotation not available
   
  0.700
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.700
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.681
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.