STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000007202annotation not available (431 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.991
ENSEEUP00000006787
annotation not available
   
 0.961
FIP1L1
pre-mRNA 3'-end-processing factor FIP1 isoform X1.
    
 0.889
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.871
CPSF4
Cleavage and polyadenylation specificity factor subunit 4 isoform X2.
    
 0.869
ENSEEUP00000000236
annotation not available
     
 0.841
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
   
 
 0.821
WDR33
WD repeat domain 33.
   
 
 0.792
INTS9
Integrator complex subunit 9.
   
 0.780
ZC3H4
LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 4.
    
 0.774
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.