STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAMSAP1Calmodulin-regulated spectrin-associated protein 1 isoform X5. (1316 aa)    
Predicted Functional Partners:
WDR47
WD repeat-containing protein 47 isoform X2.
 
  
 
 0.661
UBAC1
Ubiquitin-associated domain-containing protein 1.
 
    
 0.645
ENSEEUP00000000396
annotation not available
 
 
 
0.563
APPL2
DCC-interacting protein 13-beta isoform X5.
   
   0.556
APPL1
DCC-interacting protein 13-alpha.
   
   0.556
ENSEEUP00000008492
annotation not available
    
 
 0.516
CLASP1
CLIP-associating protein 1 isoform X6.
    
 
 0.507
SNAPC4
snRNA-activating protein complex subunit 4.
      
 0.491
HAL
Histidine ammonia-lyase.
      
 0.476
PMPCA
Mitochondrial-processing peptidase subunit alpha; Belongs to the peptidase M16 family.
      
 0.470
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.