STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA4Protein shisa-4. (143 aa)    
Predicted Functional Partners:
SH3D21
SH3 domain-containing protein 21.
      
 0.746
LRRC40
Leucine-rich repeat-containing protein 40.
      
 0.736
BEND7
BEN domain-containing protein 7.
      
 0.735
MOCS1
Molybdenum cofactor biosynthesis protein 1 isoform X1.
      
 0.717
NAIF1
Nuclear apoptosis-inducing factor 1.
      
 0.705
EDC4
Enhancer of mRNA-decapping protein 4.
   
  
 0.698
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
    
 
 0.695
SNAPC3
snRNA-activating protein complex subunit 3 isoform X1.
      
 0.687
LEPROTL1
Leptin receptor overlapping transcript-like 1.
      
 0.686
PTPRO
Receptor-type tyrosine-protein phosphatase O.
      
 0.686
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.