Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSEEUP00000002093 | ENSEEUP00000011081 | ENSEEUP00000002093 | ENSEEUP00000011081 | annotation not available | annotation not available | 0.980 |
ENSEEUP00000002093 | MCM7 | ENSEEUP00000002093 | ENSEEUP00000007000 | annotation not available | Minichromosome maintenance complex component 7. | 0.989 |
ENSEEUP00000002093 | ORC1 | ENSEEUP00000002093 | ENSEEUP00000011217 | annotation not available | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.895 |
ENSEEUP00000002093 | PALB2 | ENSEEUP00000002093 | ENSEEUP00000014085 | annotation not available | Partner and localizer of BRCA2 isoform X2. | 0.564 |
ENSEEUP00000002093 | PCNA | ENSEEUP00000002093 | ENSEEUP00000002812 | annotation not available | Proliferating cell nuclear antigen. | 0.983 |
ENSEEUP00000002093 | PRIM2 | ENSEEUP00000002093 | ENSEEUP00000002059 | annotation not available | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.980 |
ENSEEUP00000002093 | RNASEH2A | ENSEEUP00000002093 | ENSEEUP00000007479 | annotation not available | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.903 |
ENSEEUP00000002093 | RNASEH2B | ENSEEUP00000002093 | ENSEEUP00000006776 | annotation not available | Ribonuclease H2 subunit B isoform X2. | 0.473 |
ENSEEUP00000002093 | TOP1 | ENSEEUP00000002093 | ENSEEUP00000007205 | annotation not available | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.773 |
ENSEEUP00000011081 | ENSEEUP00000002093 | ENSEEUP00000011081 | ENSEEUP00000002093 | annotation not available | annotation not available | 0.980 |
ENSEEUP00000011081 | MCM7 | ENSEEUP00000011081 | ENSEEUP00000007000 | annotation not available | Minichromosome maintenance complex component 7. | 0.953 |
ENSEEUP00000011081 | ORC1 | ENSEEUP00000011081 | ENSEEUP00000011217 | annotation not available | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.885 |
ENSEEUP00000011081 | PCNA | ENSEEUP00000011081 | ENSEEUP00000002812 | annotation not available | Proliferating cell nuclear antigen. | 0.974 |
ENSEEUP00000011081 | PRIM2 | ENSEEUP00000011081 | ENSEEUP00000002059 | annotation not available | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.999 |
ENSEEUP00000011081 | RNASEH2A | ENSEEUP00000011081 | ENSEEUP00000007479 | annotation not available | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.901 |
ENSEEUP00000011081 | RNASEH2B | ENSEEUP00000011081 | ENSEEUP00000006776 | annotation not available | Ribonuclease H2 subunit B isoform X2. | 0.549 |
ENSEEUP00000011081 | TOP1 | ENSEEUP00000011081 | ENSEEUP00000007205 | annotation not available | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.476 |
ENSEEUP00000011081 | TYMS | ENSEEUP00000011081 | ENSEEUP00000008242 | annotation not available | Thymidylate synthase. | 0.856 |
MCM7 | ENSEEUP00000002093 | ENSEEUP00000007000 | ENSEEUP00000002093 | Minichromosome maintenance complex component 7. | annotation not available | 0.989 |
MCM7 | ENSEEUP00000011081 | ENSEEUP00000007000 | ENSEEUP00000011081 | Minichromosome maintenance complex component 7. | annotation not available | 0.953 |
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