STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM1Protein-glutamine gamma-glutamyltransferase K. (566 aa)    
Predicted Functional Partners:
ENSEEUP00000002934
annotation not available
     
 0.905
CDSN
Corneodesmosin.
   
 
 0.827
F13B
Coagulation factor XIII B chain.
    
 0.808
EVPL
Envoplakin isoform X2.
     
 0.796
PNPLA1
Patatin-like phospholipase domain-containing protein 1.
      
 0.766
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
     
 0.659
SLC27A4
Long-chain fatty acid transport protein 4.
      
 0.653
NIPAL4
Magnesium transporter NIPA4.
      
 0.649
ENSEEUP00000013788
annotation not available
    
 
 0.649
ABCA12
ATP-binding cassette sub-family A member 12.
      
 0.648
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.