STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9Late secretory pathway protein AVL9 homolog. (524 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
      
 0.956
ENSEEUP00000005387
annotation not available
      
 0.829
RAB30
Ras-related protein Rab-30.
      
 0.801
ENSEEUP00000006244
annotation not available
      
 0.799
DENND4C
DENN domain-containing protein 4C.
      
 0.683
RAB18
Ras-related protein Rab-18 isoform X1.
      
 0.668
RAB35
Ras-related protein Rab-35.
      
 0.663
DENND4B
DENN domain-containing protein 4B isoform X2.
      
 0.655
DENND2A
DENN domain-containing protein 2A.
      
 0.651
ENSEEUP00000014574
annotation not available
      
 0.647
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (16%) [HD]