STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2G patch domain-containing protein 2 isoform X1. (511 aa)    
Predicted Functional Partners:
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.
    
 0.965
DDX10
RNA helicase.
    
 0.940
DDX18
RNA helicase.
    
  0.936
ENSEEUP00000000207
annotation not available
    
 
 0.929
NOL6
Nucleolar protein 6.
   
 
 0.926
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
    
 
 0.923
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.922
ENSEEUP00000008634
annotation not available
    
   0.922
ENSEEUP00000013960
annotation not available
    
   0.922
RRP15
RRP15-like protein.
      
 0.815
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.