STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000008045annotation not available (926 aa)    
Predicted Functional Partners:
RLIM
E3 ubiquitin-protein ligase RLIM.
   
  
 0.746
GSPT2
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
    
 
 0.713
GSPT1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1.
    
 
 0.713
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.657
QSER1
Glutamine and serine-rich protein 1.
   
  
 0.646
PNISR
Arginine/serine-rich protein PNISR.
      
 0.532
ENSEEUP00000012035
annotation not available
      
 0.532
PPEF1
Serine/threonine-protein phosphatase with EF-hands.
      
 0.508
ENSEEUP00000011968
annotation not available
      
 0.508
ZNF518B
Zinc finger protein 518B.
    
 
 0.506
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.