STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK2Serine/threonine-protein kinase VRK2. (508 aa)    
Predicted Functional Partners:
ANKLE2
Ankyrin repeat and LEM domain-containing protein 2 isoform X1.
   
 0.945
ENSEEUP00000007936
annotation not available
    
 0.848
FAM83H
Protein FAM83H isoform X2.
    
 
 0.831
RIOK2
Serine/threonine-protein kinase RIO2.
    
 0.826
ENSEEUP00000007231
annotation not available
    
 0.810
TSR1
pre-rRNA-processing protein TSR1 homolog.
    
 0.793
PER1
Period circadian protein homolog 1 isoform X1.
    
 0.786
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.767
CRY2
Cryptochrome-2.
    
 0.750
CRY1
Cryptochrome circadian regulator 1.
    
 0.710
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.