STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIT1tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (473 aa)    
Predicted Functional Partners:
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
      0.888
FTSJ1
Putative tRNA (Cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
  
  
 0.834
ENSEEUP00000001536
annotation not available
    
 0.813
TRMT10B
tRNA methyltransferase 10 homolog B.
   
  
 0.798
ENSEEUP00000008724
annotation not available
  
  
 0.793
NT5C1A
Cytosolic 5'-nucleotidase 1A.
  
  
 0.780
PDSS2
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 
 0.752
GART
annotation not available
     
 0.747
ENSEEUP00000002341
annotation not available
  
 
 0.737
LOC103116054
Isopentenyl-diphosphate delta-isomerase 2-like.
    
 0.729
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.